No. words: 1181; after pruning: 1155


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 4.5 (1,1:518)  482  1.73 0.00 0.19  UCD026F_G06_BE403597Ta19P025A03P036H011F1_036.ab1        1   519 (62)  C UCD026R_G06_BE403597Ta19P025A03P036H011R1_036.ab1   (82)   518     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  234 nodes

 119 str. conn. components

Path
    1  C UCD026R_G06_BE403597Ta19P025A03P036H011R1_036.ab1   600 
   86    UCD026F_G06_BE403597Ta19P025A03P036H011F1_036.ab1     4 
   94  C UCD026R_G06_BE403597Ta19P025A03P036H011R1_036.ab1   507 
  121    UCD026F_G06_BE403597Ta19P025A03P036H011F1_036.ab1    39 
  133  C UCD026R_G06_BE403597Ta19P025A03P036H011R1_036.ab1   468 
  164    UCD026F_G06_BE403597Ta19P025A03P036H011F1_036.ab1    82 
  168  C UCD026R_G06_BE403597Ta19P025A03P036H011R1_036.ab1   433 
  188    UCD026F_G06_BE403597Ta19P025A03P036H011F1_036.ab1   106 
  192  C UCD026R_G06_BE403597Ta19P025A03P036H011R1_036.ab1   409 
  208    UCD026F_G06_BE403597Ta19P025A03P036H011F1_036.ab1   126 
  212  C UCD026R_G06_BE403597Ta19P025A03P036H011R1_036.ab1   389 
  228    UCD026F_G06_BE403597Ta19P025A03P036H011F1_036.ab1   146 
  232  C UCD026R_G06_BE403597Ta19P025A03P036H011R1_036.ab1   369 
  236    UCD026F_G06_BE403597Ta19P025A03P036H011F1_036.ab1   154 
  240  C UCD026R_G06_BE403597Ta19P025A03P036H011R1_036.ab1   361 
  244    UCD026F_G06_BE403597Ta19P025A03P036H011F1_036.ab1   162 
  248  C UCD026R_G06_BE403597Ta19P025A03P036H011R1_036.ab1   353 
  282    UCD026F_G06_BE403597Ta19P025A03P036H011F1_036.ab1   200 
  286  C UCD026R_G06_BE403597Ta19P025A03P036H011R1_036.ab1   315 
  298    UCD026F_G06_BE403597Ta19P025A03P036H011F1_036.ab1   216 
  302  C UCD026R_G06_BE403597Ta19P025A03P036H011R1_036.ab1   299 
  361    UCD026F_G06_BE403597Ta19P025A03P036H011F1_036.ab1   279 
  369  C UCD026R_G06_BE403597Ta19P025A03P036H011R1_036.ab1   232 
  396    UCD026F_G06_BE403597Ta19P025A03P036H011F1_036.ab1   314 
  400  C UCD026R_G06_BE403597Ta19P025A03P036H011R1_036.ab1   201 
  424    UCD026F_G06_BE403597Ta19P025A03P036H011F1_036.ab1   342 
  428  C UCD026R_G06_BE403597Ta19P025A03P036H011R1_036.ab1   173 
  440    UCD026F_G06_BE403597Ta19P025A03P036H011F1_036.ab1   358 
  444  C UCD026R_G06_BE403597Ta19P025A03P036H011R1_036.ab1   157 
  452    UCD026F_G06_BE403597Ta19P025A03P036H011F1_036.ab1   370 
  456  C UCD026R_G06_BE403597Ta19P025A03P036H011R1_036.ab1   145 
  476    UCD026F_G06_BE403597Ta19P025A03P036H011F1_036.ab1   394 
  480  C UCD026R_G06_BE403597Ta19P025A03P036H011R1_036.ab1   121 
  492    UCD026F_G06_BE403597Ta19P025A03P036H011F1_036.ab1   410 
  496  C UCD026R_G06_BE403597Ta19P025A03P036H011R1_036.ab1   105 
  522    UCD026F_G06_BE403597Ta19P025A03P036H011F1_036.ab1   440 
  526  C UCD026R_G06_BE403597Ta19P025A03P036H011R1_036.ab1    75 
  586    UCD026F_G06_BE403597Ta19P025A03P036H011F1_036.ab1   504 
Contig length: old 662, new 663

Contig length: old 663, new 663
New start: 0