No. words: 1503; after pruning: 1477


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.0 (1,1:710)  699  0.28 0.14 0.00  UCD026F_B09_BE403597Ta20P025B03P036H011F1_077.ab1        1   711 (47)  C UCD026R_B09_BE403597Ta20P025B03P036H011R1_077.ab1   (33)   712     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  348 nodes

 176 str. conn. components

Path
    1  C UCD026R_B09_BE403597Ta20P025B03P036H011R1_077.ab1   745 
   44    UCD026F_B09_BE403597Ta20P025B03P036H011F1_077.ab1    10 
  498  C UCD026R_B09_BE403597Ta20P025B03P036H011R1_077.ab1   248 
  578    UCD026F_B09_BE403597Ta20P025B03P036H011F1_077.ab1   544 
  582  C UCD026R_B09_BE403597Ta20P025B03P036H011R1_077.ab1   164 
  650    UCD026F_B09_BE403597Ta20P025B03P036H011F1_077.ab1   616 
  662  C UCD026R_B09_BE403597Ta20P025B03P036H011R1_077.ab1    84 
  738    UCD026F_B09_BE403597Ta20P025B03P036H011F1_077.ab1   704 
Contig length: old 792, new 792

Contig length: old 792, new 792
New start: 0