No. words: 1117; after pruning: 1091


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    2    0.0 5.7 (1,1:518)  455  3.29 0.00 0.19  UCD026F_A07_BE403597Ta21P025A03P036H011F1_063.ab1        3   519 (1)  C UCD026R_A07_BE403597Ta21P025A03P036H011R1_063.ab1   (81)   516     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 2       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  208 nodes

 106 str. conn. components

Path
    1  C UCD026R_A07_BE403597Ta21P025A03P036H011R1_063.ab1   597 
  565    UCD026F_A07_BE403597Ta21P025A03P036H011F1_063.ab1   487 
  576  C UCD026R_A07_BE403597Ta21P025A03P036H011R1_063.ab1    22 
Contig length: old 598, new 597

Contig length: old 597, new 597
New start: 0 
S Change at: 421; seg lengths: entry 1, contig 1