No. words: 1617; after pruning: 1591


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 17.3 (1,1:784)  777  0.00 0.00 0.13  UCD026F_F03_BE403597Ta22P025H02P036H011F1_021.ab1        1   785 (30)  C UCD026R_F03_BE403597Ta22P025H02P036H011R1_021.ab1   (18)   784     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  390 nodes

 197 str. conn. components

Path
    1  C UCD026R_F03_BE403597Ta22P025H02P036H011R1_021.ab1   802 
   22    UCD026F_F03_BE403597Ta22P025H02P036H011F1_021.ab1     4 
   54  C UCD026R_F03_BE403597Ta22P025H02P036H011R1_021.ab1   749 
   58    UCD026F_F03_BE403597Ta22P025H02P036H011F1_021.ab1    40 
   62  C UCD026R_F03_BE403597Ta22P025H02P036H011R1_021.ab1   741 
   70    UCD026F_F03_BE403597Ta22P025H02P036H011F1_021.ab1    52 
   78  C UCD026R_F03_BE403597Ta22P025H02P036H011R1_021.ab1   725 
   82    UCD026F_F03_BE403597Ta22P025H02P036H011F1_021.ab1    64 
  106  C UCD026R_F03_BE403597Ta22P025H02P036H011R1_021.ab1   697 
  110    UCD026F_F03_BE403597Ta22P025H02P036H011F1_021.ab1    92 
  218  C UCD026R_F03_BE403597Ta22P025H02P036H011R1_021.ab1   585 
  222    UCD026F_F03_BE403597Ta22P025H02P036H011F1_021.ab1   204 
  226  C UCD026R_F03_BE403597Ta22P025H02P036H011R1_021.ab1   577 
  246    UCD026F_F03_BE403597Ta22P025H02P036H011F1_021.ab1   228 
  250  C UCD026R_F03_BE403597Ta22P025H02P036H011R1_021.ab1   553 
  254    UCD026F_F03_BE403597Ta22P025H02P036H011F1_021.ab1   236 
  290  C UCD026R_F03_BE403597Ta22P025H02P036H011R1_021.ab1   513 
  302    UCD026F_F03_BE403597Ta22P025H02P036H011F1_021.ab1   284 
  310  C UCD026R_F03_BE403597Ta22P025H02P036H011R1_021.ab1   493 
  334    UCD026F_F03_BE403597Ta22P025H02P036H011F1_021.ab1   316 
  350  C UCD026R_F03_BE403597Ta22P025H02P036H011R1_021.ab1   453 
  354    UCD026F_F03_BE403597Ta22P025H02P036H011F1_021.ab1   336 
  366  C UCD026R_F03_BE403597Ta22P025H02P036H011R1_021.ab1   437 
  390    UCD026F_F03_BE403597Ta22P025H02P036H011F1_021.ab1   372 
  438  C UCD026R_F03_BE403597Ta22P025H02P036H011R1_021.ab1   365 
  446    UCD026F_F03_BE403597Ta22P025H02P036H011F1_021.ab1   428 
  462  C UCD026R_F03_BE403597Ta22P025H02P036H011R1_021.ab1   341 
  486    UCD026F_F03_BE403597Ta22P025H02P036H011F1_021.ab1   468 
  498  C UCD026R_F03_BE403597Ta22P025H02P036H011R1_021.ab1   305 
  502    UCD026F_F03_BE403597Ta22P025H02P036H011F1_021.ab1   484 
  514  C UCD026R_F03_BE403597Ta22P025H02P036H011R1_021.ab1   289 
  518    UCD026F_F03_BE403597Ta22P025H02P036H011F1_021.ab1   500 
  530  C UCD026R_F03_BE403597Ta22P025H02P036H011R1_021.ab1   273 
  550    UCD026F_F03_BE403597Ta22P025H02P036H011F1_021.ab1   532 
  562  C UCD026R_F03_BE403597Ta22P025H02P036H011R1_021.ab1   241 
  590    UCD026F_F03_BE403597Ta22P025H02P036H011F1_021.ab1   572 
  594  C UCD026R_F03_BE403597Ta22P025H02P036H011R1_021.ab1   209 
  630    UCD026F_F03_BE403597Ta22P025H02P036H011F1_021.ab1   612 
  646  C UCD026R_F03_BE403597Ta22P025H02P036H011R1_021.ab1   157 
  666    UCD026F_F03_BE403597Ta22P025H02P036H011F1_021.ab1   648 
  670  C UCD026R_F03_BE403597Ta22P025H02P036H011R1_021.ab1   133 
  790    UCD026F_F03_BE403597Ta22P025H02P036H011F1_021.ab1   772 
Contig length: old 832, new 833

Contig length: old 833, new 833
New start: 0