No. words: 1602; after pruning: 1576


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 15.6 (1,1:773)  756  0.39 0.00 0.13  UCD026F_G03_BE403597Ta23P025H02P036H011F1_019.ab1        1   773 (47)  C UCD026R_G03_BE403597Ta23P025H02P036H011R1_019.ab1   (9)   773     2 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  378 nodes

 191 str. conn. components

Path
    1  C UCD026R_G03_BE403597Ta23P025H02P036H011R1_019.ab1   782 
   17    UCD026F_G03_BE403597Ta23P025H02P036H011F1_019.ab1     8 
   58  C UCD026R_G03_BE403597Ta23P025H02P036H011R1_019.ab1   725 
   62    UCD026F_G03_BE403597Ta23P025H02P036H011F1_019.ab1    53 
   78  C UCD026R_G03_BE403597Ta23P025H02P036H011R1_019.ab1   705 
   82    UCD026F_G03_BE403597Ta23P025H02P036H011F1_019.ab1    73 
  220  C UCD026R_G03_BE403597Ta23P025H02P036H011R1_019.ab1   564 
  224    UCD026F_G03_BE403597Ta23P025H02P036H011F1_019.ab1   215 
  300  C UCD026R_G03_BE403597Ta23P025H02P036H011R1_019.ab1   484 
  348    UCD026F_G03_BE403597Ta23P025H02P036H011F1_019.ab1   339 
  360  C UCD026R_G03_BE403597Ta23P025H02P036H011R1_019.ab1   424 
  364    UCD026F_G03_BE403597Ta23P025H02P036H011F1_019.ab1   355 
  368  C UCD026R_G03_BE403597Ta23P025H02P036H011R1_019.ab1   416 
  372    UCD026F_G03_BE403597Ta23P025H02P036H011F1_019.ab1   363 
  432  C UCD026R_G03_BE403597Ta23P025H02P036H011R1_019.ab1   352 
  436    UCD026F_G03_BE403597Ta23P025H02P036H011F1_019.ab1   427 
  460  C UCD026R_G03_BE403597Ta23P025H02P036H011R1_019.ab1   324 
  480    UCD026F_G03_BE403597Ta23P025H02P036H011F1_019.ab1   471 
  488  C UCD026R_G03_BE403597Ta23P025H02P036H011R1_019.ab1   296 
  492    UCD026F_G03_BE403597Ta23P025H02P036H011F1_019.ab1   483 
  512  C UCD026R_G03_BE403597Ta23P025H02P036H011R1_019.ab1   272 
  540    UCD026F_G03_BE403597Ta23P025H02P036H011F1_019.ab1   531 
  544  C UCD026R_G03_BE403597Ta23P025H02P036H011R1_019.ab1   240 
  620    UCD026F_G03_BE403597Ta23P025H02P036H011F1_019.ab1   611 
  628  C UCD026R_G03_BE403597Ta23P025H02P036H011R1_019.ab1   156 
  656    UCD026F_G03_BE403597Ta23P025H02P036H011F1_019.ab1   647 
  664  C UCD026R_G03_BE403597Ta23P025H02P036H011R1_019.ab1   120 
  704    UCD026F_G03_BE403597Ta23P025H02P036H011F1_019.ab1   695 
  708  C UCD026R_G03_BE403597Ta23P025H02P036H011R1_019.ab1    76 
  764    UCD026F_G03_BE403597Ta23P025H02P036H011F1_019.ab1   755 
  768  C UCD026R_G03_BE403597Ta23P025H02P036H011R1_019.ab1    16 
  776    UCD026F_G03_BE403597Ta23P025H02P036H011F1_019.ab1   767 
Contig length: old 828, new 829

Contig length: old 829, new 829
New start: 0 
S Change at: 30; seg lengths: entry 1, contig 1