No. words: 1173; after pruning: 1147


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    2    0.0 5.6 (1,1:509)  481  1.38 0.00 0.00  UCD026F_E04_BE403597Td01P025A03P036H011F1_024.ab1        3   509 (72)  C UCD026R_E04_BE403597Td01P025A03P036H011R1_024.ab1   (84)   508     2 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 2       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  232 nodes

 118 str. conn. components

Path
    1  C UCD026R_E04_BE403597Td01P025A03P036H011R1_024.ab1   592 
  588    UCD026F_E04_BE403597Td01P025A03P036H011F1_024.ab1   506 
Contig length: old 663, new 663

Contig length: old 663, new 663
New start: 0