No. words: 1602; after pruning: 1576


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 16.2 (1,1:744)  733  0.40 0.00 0.00  UCD026F_A01_BE403597Td01P025H02P036H011F1_015.ab1        1   745 (46)  C UCD026R_A01_BE403597Td01P025H02P036H011R1_015.ab1   (66)   745     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  366 nodes

 185 str. conn. components

Path
    1  C UCD026R_A01_BE403597Td01P025H02P036H011R1_015.ab1   811 
   70    UCD026F_A01_BE403597Td01P025H02P036H011F1_015.ab1     4 
   82  C UCD026R_A01_BE403597Td01P025H02P036H011R1_015.ab1   730 
   86    UCD026F_A01_BE403597Td01P025H02P036H011F1_015.ab1    20 
   90  C UCD026R_A01_BE403597Td01P025H02P036H011R1_015.ab1   722 
  116    UCD026F_A01_BE403597Td01P025H02P036H011F1_015.ab1    50 
  132  C UCD026R_A01_BE403597Td01P025H02P036H011R1_015.ab1   680 
  140    UCD026F_A01_BE403597Td01P025H02P036H011F1_015.ab1    74 
  164  C UCD026R_A01_BE403597Td01P025H02P036H011R1_015.ab1   648 
  208    UCD026F_A01_BE403597Td01P025H02P036H011F1_015.ab1   142 
  212  C UCD026R_A01_BE403597Td01P025H02P036H011R1_015.ab1   600 
  272    UCD026F_A01_BE403597Td01P025H02P036H011F1_015.ab1   206 
  276  C UCD026R_A01_BE403597Td01P025H02P036H011R1_015.ab1   536 
  295    UCD026F_A01_BE403597Td01P025H02P036H011F1_015.ab1   229 
  299  C UCD026R_A01_BE403597Td01P025H02P036H011R1_015.ab1   513 
  527    UCD026F_A01_BE403597Td01P025H02P036H011F1_015.ab1   461 
  531  C UCD026R_A01_BE403597Td01P025H02P036H011R1_015.ab1   281 
  807    UCD026F_A01_BE403597Td01P025H02P036H011F1_015.ab1   741 
Contig length: old 857, new 857

Contig length: old 857, new 857
New start: 0