No. words: 1610; after pruning: 1584


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 16.6 (1,1:772)  764  0.26 0.00 0.00  UCD026F_B01_BE403597Td02P025H02P036H011F1_013.ab1        1   773 (23)  C UCD026R_B01_BE403597Td02P025H02P036H011R1_013.ab1   (41)   773     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  382 nodes

 193 str. conn. components

Path
    1  C UCD026R_B01_BE403597Td02P025H02P036H011R1_013.ab1   814 
   51    UCD026F_B01_BE403597Td02P025H02P036H011F1_013.ab1    10 
   59  C UCD026R_B01_BE403597Td02P025H02P036H011R1_013.ab1   756 
   75    UCD026F_B01_BE403597Td02P025H02P036H011F1_013.ab1    34 
   79  C UCD026R_B01_BE403597Td02P025H02P036H011R1_013.ab1   736 
   87    UCD026F_B01_BE403597Td02P025H02P036H011F1_013.ab1    46 
   95  C UCD026R_B01_BE403597Td02P025H02P036H011R1_013.ab1   720 
  103    UCD026F_B01_BE403597Td02P025H02P036H011F1_013.ab1    62 
  107  C UCD026R_B01_BE403597Td02P025H02P036H011R1_013.ab1   708 
  111    UCD026F_B01_BE403597Td02P025H02P036H011F1_013.ab1    70 
  135  C UCD026R_B01_BE403597Td02P025H02P036H011R1_013.ab1   680 
  139    UCD026F_B01_BE403597Td02P025H02P036H011F1_013.ab1    98 
  151  C UCD026R_B01_BE403597Td02P025H02P036H011R1_013.ab1   664 
  155    UCD026F_B01_BE403597Td02P025H02P036H011F1_013.ab1   114 
  167  C UCD026R_B01_BE403597Td02P025H02P036H011R1_013.ab1   648 
  207    UCD026F_B01_BE403597Td02P025H02P036H011F1_013.ab1   166 
  219  C UCD026R_B01_BE403597Td02P025H02P036H011R1_013.ab1   596 
  243    UCD026F_B01_BE403597Td02P025H02P036H011F1_013.ab1   202 
  247  C UCD026R_B01_BE403597Td02P025H02P036H011R1_013.ab1   568 
  275    UCD026F_B01_BE403597Td02P025H02P036H011F1_013.ab1   234 
  283  C UCD026R_B01_BE403597Td02P025H02P036H011R1_013.ab1   532 
  306    UCD026F_B01_BE403597Td02P025H02P036H011F1_013.ab1   265 
  310  C UCD026R_B01_BE403597Td02P025H02P036H011R1_013.ab1   505 
  314    UCD026F_B01_BE403597Td02P025H02P036H011F1_013.ab1   273 
  318  C UCD026R_B01_BE403597Td02P025H02P036H011R1_013.ab1   497 
  734    UCD026F_B01_BE403597Td02P025H02P036H011F1_013.ab1   693 
  742  C UCD026R_B01_BE403597Td02P025H02P036H011R1_013.ab1    73 
  778    UCD026F_B01_BE403597Td02P025H02P036H011F1_013.ab1   737 
  782  C UCD026R_B01_BE403597Td02P025H02P036H011R1_013.ab1    33 
  802    UCD026F_B01_BE403597Td02P025H02P036H011F1_013.ab1   761 
Contig length: old 837, new 837

Contig length: old 837, new 837
New start: 0