No. words: 1586; after pruning: 1560


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 16.1 (1,1:732)  727  0.14 0.00 0.00  UCD026F_G01_BE403597Td07P025H02P036H011F1_003.ab1        1   733 (64)  C UCD026R_G01_BE403597Td07P025H02P036H011R1_003.ab1   (56)   733     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  366 nodes

 185 str. conn. components

Path
    1  C UCD026R_G01_BE403597Td07P025H02P036H011R1_003.ab1   789 
   64    UCD026F_G01_BE403597Td07P025H02P036H011F1_003.ab1     8 
   72  C UCD026R_G01_BE403597Td07P025H02P036H011R1_003.ab1   718 
   80    UCD026F_G01_BE403597Td07P025H02P036H011F1_003.ab1    24 
   84  C UCD026R_G01_BE403597Td07P025H02P036H011R1_003.ab1   706 
   88    UCD026F_G01_BE403597Td07P025H02P036H011F1_003.ab1    32 
   96  C UCD026R_G01_BE403597Td07P025H02P036H011R1_003.ab1   694 
  100    UCD026F_G01_BE403597Td07P025H02P036H011F1_003.ab1    44 
  122  C UCD026R_G01_BE403597Td07P025H02P036H011R1_003.ab1   668 
  126    UCD026F_G01_BE403597Td07P025H02P036H011F1_003.ab1    70 
  134  C UCD026R_G01_BE403597Td07P025H02P036H011R1_003.ab1   656 
  138    UCD026F_G01_BE403597Td07P025H02P036H011F1_003.ab1    82 
  154  C UCD026R_G01_BE403597Td07P025H02P036H011R1_003.ab1   636 
  186    UCD026F_G01_BE403597Td07P025H02P036H011F1_003.ab1   130 
  206  C UCD026R_G01_BE403597Td07P025H02P036H011R1_003.ab1   584 
  210    UCD026F_G01_BE403597Td07P025H02P036H011F1_003.ab1   154 
  218  C UCD026R_G01_BE403597Td07P025H02P036H011R1_003.ab1   572 
  222    UCD026F_G01_BE403597Td07P025H02P036H011F1_003.ab1   166 
  226  C UCD026R_G01_BE403597Td07P025H02P036H011R1_003.ab1   564 
  230    UCD026F_G01_BE403597Td07P025H02P036H011F1_003.ab1   174 
  234  C UCD026R_G01_BE403597Td07P025H02P036H011R1_003.ab1   556 
  262    UCD026F_G01_BE403597Td07P025H02P036H011F1_003.ab1   206 
  274  C UCD026R_G01_BE403597Td07P025H02P036H011R1_003.ab1   516 
  282    UCD026F_G01_BE403597Td07P025H02P036H011F1_003.ab1   226 
  290  C UCD026R_G01_BE403597Td07P025H02P036H011R1_003.ab1   500 
  294    UCD026F_G01_BE403597Td07P025H02P036H011F1_003.ab1   238 
  310  C UCD026R_G01_BE403597Td07P025H02P036H011R1_003.ab1   480 
  350    UCD026F_G01_BE403597Td07P025H02P036H011F1_003.ab1   294 
  354  C UCD026R_G01_BE403597Td07P025H02P036H011R1_003.ab1   436 
  362    UCD026F_G01_BE403597Td07P025H02P036H011F1_003.ab1   306 
  370  C UCD026R_G01_BE403597Td07P025H02P036H011R1_003.ab1   420 
  518    UCD026F_G01_BE403597Td07P025H02P036H011F1_003.ab1   462 
  530  C UCD026R_G01_BE403597Td07P025H02P036H011R1_003.ab1   260 
  618    UCD026F_G01_BE403597Td07P025H02P036H011F1_003.ab1   562 
  622  C UCD026R_G01_BE403597Td07P025H02P036H011R1_003.ab1   168 
  678    UCD026F_G01_BE403597Td07P025H02P036H011F1_003.ab1   622 
  686  C UCD026R_G01_BE403597Td07P025H02P036H011R1_003.ab1   104 
  726    UCD026F_G01_BE403597Td07P025H02P036H011F1_003.ab1   670 
  730  C UCD026R_G01_BE403597Td07P025H02P036H011R1_003.ab1    60 
  766    UCD026F_G01_BE403597Td07P025H02P036H011F1_003.ab1   710 
  770  C UCD026R_G01_BE403597Td07P025H02P036H011R1_003.ab1    20 
  782    UCD026F_G01_BE403597Td07P025H02P036H011F1_003.ab1   726 
Contig length: old 853, new 853

Contig length: old 853, new 853
New start: 0