No. words: 783; after pruning: 757


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 1.5 (1,1:528)  105  3.82 0.76 0.76  UCD005F_D08_BE403803LD02P012G01G071F1_058.ab1        2   132 (0)  C UCD005R_D08_BE403803LD02P012G01G071R1_058.ab1   (124)   527   397 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  58 nodes

 31 str. conn. components

Path
    1  C UCD005R_D08_BE403803LD02P012G01G071R1_058.ab1   651 
Contig length: old 651, new 651

Contig length: old 651, new 651
New start: 0