No. words: 1418; after pruning: 1366 Histogram of relative pair offsets, for read pairs with multiple alignments: Pass 1 Gap Score Pass: 1 #reads #contigs (not counting singlets) 1 4 N.B. Following not based on all pairs!! Lowest # merges # failures LLR score Gap # merges # failures size Offset Pass 3 Gap Score Merge:(0) 1 0.0 5.3 (1,1:377) 371 0.00 0.00 0.27 UCD020F_E10_BE403803Sn31P025C02P012G071F2_072.ab1 1 377 (60) C UCD020R_E10_BE403803Sn31P025C02P012G071R2_072.ab1 (61) 377 2 * 0 -63 431 433 143 E 289- 431 Fail: (1) 143 0.0 3.1 (2,1:3) 248 4.50 0.00 0.00 UCD020R_E10_BE403803Sn31P025C02P012G071R2_072.ab1 87 375 (63) C UCD010F_E10_BE403803Sn31P025C02P012G071F1_072.ab1 (143) 289 1 Merge:(0) 0 0.0 2.4 (2,1:51) 110 0.00 0.00 0.00 UCD020R_E10_BE403803Sn31P025C02P012G071R2_072.ab1 327 437 (1) UCD010R_E10_BE403803Sn31P025C02P012G071R1_072.ab1 1 111 (0) * 0 -63 431 433 143 E 289- 431 Fail: (1) 143 0.0 1.0 (3,1:3) 49 0.00 0.00 0.00 UCD010R_E10_BE403803Sn31P025C02P012G071R1_072.ab1 1 49 (62) C UCD010F_E10_BE403803Sn31P025C02P012G071F1_072.ab1 (383) 49 1 * Pass: 3 #reads #contigs (not counting singlets) 1 1 3 1 N.B. Following not based on all pairs!! Lowest # merges # failures LLR score 0.0 2 2 Gap # merges # failures size 0 1 0 1 1 0 143 0 2 Offset 0 4 1 4 Pass 4 Gap Score 0 -63 431 433 143 E 289- 431 Fail: (1) 143 0.0 3.1 (3,1:3) 248 4.50 0.00 0.00 UCD020R_E10_BE403803Sn31P025C02P012G071R2_072.ab1 87 375 (63) C UCD010F_E10_BE403803Sn31P025C02P012G071F1_072.ab1 (143) 289 1 -431 -441 0 55 306 E -305- 0 Fail: (1) 306 0.0 2.2 (3,1:381) 101 0.00 0.00 0.00 UCD010R_E10_BE403803Sn31P025C02P012G071R1_072.ab1 1 102 (9) UCD010F_E10_BE403803Sn31P025C02P012G071F1_072.ab1 331 432 (0) * Pass: 4 #reads #contigs (not counting singlets) 1 1 3 1 N.B. Following not based on all pairs!! Lowest # merges # failures LLR score 0.0 0 2 Gap # merges # failures size 143 0 1 306 0 1 Offset 0 4 1 1 Read equivalence class histogram: 1 1 3 1 Chimera merges: Merge:(0) 143 0.0 3.7 (3,1:3) 248 4.50 0.00 0.00 UCD020R_E10_BE403803Sn31P025C02P012G071R2_072.ab1 87 375 (63) C UCD010F_E10_BE403803Sn31P025C02P012G071F1_072.ab1 (143) 289 1 Contig 1: 524 nodes 173 str. conn. components Path 1 C UCD010R_E10_BE403803Sn31P025C02P012G071R1_072.ab1 111 4 C UCD020R_E10_BE403803Sn31P025C02P012G071R2_072.ab1 434 8 C UCD010R_E10_BE403803Sn31P025C02P012G071R1_072.ab1 104 16 C UCD020R_E10_BE403803Sn31P025C02P012G071R2_072.ab1 422 24 C UCD010R_E10_BE403803Sn31P025C02P012G071R1_072.ab1 88 28 C UCD020R_E10_BE403803Sn31P025C02P012G071R2_072.ab1 410 80 UCD020F_E10_BE403803Sn31P025C02P012G071F2_072.ab1 20 86 C UCD020R_E10_BE403803Sn31P025C02P012G071R2_072.ab1 352 96 UCD010F_E10_BE403803Sn31P025C02P012G071F1_072.ab1 34 100 C UCD020R_E10_BE403803Sn31P025C02P012G071R2_072.ab1 338 118 UCD010F_E10_BE403803Sn31P025C02P012G071F1_072.ab1 56 122 C UCD020R_E10_BE403803Sn31P025C02P012G071R2_072.ab1 316 166 UCD010F_E10_BE403803Sn31P025C02P012G071F1_072.ab1 104 170 C UCD020R_E10_BE403803Sn31P025C02P012G071R2_072.ab1 268 204 UCD020F_E10_BE403803Sn31P025C02P012G071F2_072.ab1 144 206 C UCD020R_E10_BE403803Sn31P025C02P012G071R2_072.ab1 232 222 UCD020F_E10_BE403803Sn31P025C02P012G071F2_072.ab1 162 224 C UCD020R_E10_BE403803Sn31P025C02P012G071R2_072.ab1 214 238 UCD020F_E10_BE403803Sn31P025C02P012G071F2_072.ab1 178 258 C UCD020R_E10_BE403803Sn31P025C02P012G071R2_072.ab1 180 268 UCD020F_E10_BE403803Sn31P025C02P012G071F2_072.ab1 208 272 C UCD020R_E10_BE403803Sn31P025C02P012G071R2_072.ab1 166 274 UCD020F_E10_BE403803Sn31P025C02P012G071F2_072.ab1 214 291 C UCD020R_E10_BE403803Sn31P025C02P012G071R2_072.ab1 147 292 UCD020F_E10_BE403803Sn31P025C02P012G071F2_072.ab1 232 296 C UCD020R_E10_BE403803Sn31P025C02P012G071R2_072.ab1 142 300 UCD020F_E10_BE403803Sn31P025C02P012G071F2_072.ab1 240 304 C UCD020R_E10_BE403803Sn31P025C02P012G071R2_072.ab1 134 312 UCD020F_E10_BE403803Sn31P025C02P012G071F2_072.ab1 252 328 C UCD020R_E10_BE403803Sn31P025C02P012G071R2_072.ab1 110 336 UCD020F_E10_BE403803Sn31P025C02P012G071F2_072.ab1 276 344 C UCD020R_E10_BE403803Sn31P025C02P012G071R2_072.ab1 94 348 UCD020F_E10_BE403803Sn31P025C02P012G071F2_072.ab1 288 360 C UCD020R_E10_BE403803Sn31P025C02P012G071R2_072.ab1 78 364 UCD020F_E10_BE403803Sn31P025C02P012G071F2_072.ab1 304 368 C UCD020R_E10_BE403803Sn31P025C02P012G071R2_072.ab1 70 376 UCD020F_E10_BE403803Sn31P025C02P012G071F2_072.ab1 316 412 C UCD020R_E10_BE403803Sn31P025C02P012G071R2_072.ab1 26 416 UCD020F_E10_BE403803Sn31P025C02P012G071F2_072.ab1 356 Contig length: old 497, new 497 Contig length: old 497, new 497 New start: 0