No. words: 1546; after pruning: 1494


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    
Merge:(0)    0    0.0 6.1 (1,1:-90)  279  0.70 0.00 0.00  UCD010R_B08_BE403803Ta12P025C02P012G071R1_062.ab1        1   286 (12)    UCD010F_B08_BE403803Ta12P025C02P012G071F1_062.ab1       91   376 (0) *

Pass: 1
#reads  #contigs (not counting singlets)
    1      2
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 8.3 (2,1:-99)  375  0.00 0.00 0.00  UCD010F_B08_BE403803Ta12P025C02P012G071F1_062.ab1        1   376 (0)    UCD020F_B08_BE403803Ta12P025C02P012G071F2_062.ab1       10   385 (56) *
Merge:(0)    0    0.0 6.6 (3,1:300)  355  0.81 0.00 0.27  UCD010F_B08_BE403803Ta12P025C02P012G071F1_062.ab1        7   376 (0)  C UCD020R_B08_BE403803Ta12P025C02P012G071R2_062.ab1   (47)   384    16 *

Pass: 3
#reads  #contigs (not counting singlets)
    4      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       2        0

Gap   # merges  # failures
 size
 0       2        0

Offset
  0       3 
  1       2 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    4      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    4    1

Chimera merges: 


Contig 1:  958 nodes

 257 str. conn. components

Path
    1  C UCD020R_B08_BE403803Ta12P025C02P012G071R2_062.ab1   431 
   36    UCD020F_B08_BE403803Ta12P025C02P012G071F2_062.ab1     4 
   62    UCD010F_B08_BE403803Ta12P025C02P012G071F1_062.ab1    21 
   64    UCD020F_B08_BE403803Ta12P025C02P012G071F2_062.ab1    32 
   70    UCD010F_B08_BE403803Ta12P025C02P012G071F1_062.ab1    29 
   77    UCD020F_B08_BE403803Ta12P025C02P012G071F2_062.ab1    45 
   78    UCD010F_B08_BE403803Ta12P025C02P012G071F1_062.ab1    37 
   86    UCD020F_B08_BE403803Ta12P025C02P012G071F2_062.ab1    54 
   89    UCD010F_B08_BE403803Ta12P025C02P012G071F1_062.ab1    48 
   94    UCD020F_B08_BE403803Ta12P025C02P012G071F2_062.ab1    62 
   98    UCD010F_B08_BE403803Ta12P025C02P012G071F1_062.ab1    57 
  151    UCD020F_B08_BE403803Ta12P025C02P012G071F2_062.ab1   119 
  154    UCD010F_B08_BE403803Ta12P025C02P012G071F1_062.ab1   113 
  179    UCD020F_B08_BE403803Ta12P025C02P012G071F2_062.ab1   147 
  184    UCD010F_B08_BE403803Ta12P025C02P012G071F1_062.ab1   143 
  210    UCD020F_B08_BE403803Ta12P025C02P012G071F2_062.ab1   178 
  215    UCD010F_B08_BE403803Ta12P025C02P012G071F1_062.ab1   174 
  247    UCD020F_B08_BE403803Ta12P025C02P012G071F2_062.ab1   215 
  264    UCD010F_B08_BE403803Ta12P025C02P012G071F1_062.ab1   223 
  270    UCD020F_B08_BE403803Ta12P025C02P012G071F2_062.ab1   238 
  282    UCD010F_B08_BE403803Ta12P025C02P012G071F1_062.ab1   241 
  283    UCD010R_B08_BE403803Ta12P025C02P012G071R1_062.ab1   152 
  287    UCD020F_B08_BE403803Ta12P025C02P012G071F2_062.ab1   255 
  344  C UCD020R_B08_BE403803Ta12P025C02P012G071R2_062.ab1    88 
  348    UCD020F_B08_BE403803Ta12P025C02P012G071F2_062.ab1   316 
  354    UCD010F_B08_BE403803Ta12P025C02P012G071F1_062.ab1   313 
  363    UCD020F_B08_BE403803Ta12P025C02P012G071F2_062.ab1   331 
  394  C UCD020R_B08_BE403803Ta12P025C02P012G071R2_062.ab1    38 
  400    UCD020F_B08_BE403803Ta12P025C02P012G071F2_062.ab1   368 
Contig length: old 472, new 473

Contig length: old 473, new 473
New start: 0