No. words: 1000; after pruning: 974


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    5    0.0 7.6 (1,1:431)  426  0.00 0.00 0.00  UCD014F_F01_BE403803Ta16P025H01P012G071F1_005.ab1        6   432 (80)  C UCD014R_F01_BE403803Ta16P025H01P012G071R1_005.ab1   (61)   427     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 5       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  216 nodes

 110 str. conn. components

Path
    1  C UCD014R_F01_BE403803Ta16P025H01P012G071R1_005.ab1   488 
  105    UCD014F_F01_BE403803Ta16P025H01P012G071F1_005.ab1    49 
  109  C UCD014R_F01_BE403803Ta16P025H01P012G071R1_005.ab1   380 
  129    UCD014F_F01_BE403803Ta16P025H01P012G071F1_005.ab1    73 
  133  C UCD014R_F01_BE403803Ta16P025H01P012G071R1_005.ab1   356 
  201    UCD014F_F01_BE403803Ta16P025H01P012G071F1_005.ab1   145 
  225  C UCD014R_F01_BE403803Ta16P025H01P012G071R1_005.ab1   264 
  237    UCD014F_F01_BE403803Ta16P025H01P012G071F1_005.ab1   181 
  257  C UCD014R_F01_BE403803Ta16P025H01P012G071R1_005.ab1   232 
  277    UCD014F_F01_BE403803Ta16P025H01P012G071F1_005.ab1   221 
  285  C UCD014R_F01_BE403803Ta16P025H01P012G071R1_005.ab1   204 
  305    UCD014F_F01_BE403803Ta16P025H01P012G071F1_005.ab1   249 
  325  C UCD014R_F01_BE403803Ta16P025H01P012G071R1_005.ab1   164 
  329    UCD014F_F01_BE403803Ta16P025H01P012G071F1_005.ab1   273 
  345  C UCD014R_F01_BE403803Ta16P025H01P012G071R1_005.ab1   144 
  349    UCD014F_F01_BE403803Ta16P025H01P012G071F1_005.ab1   293 
  365  C UCD014R_F01_BE403803Ta16P025H01P012G071R1_005.ab1   124 
  369    UCD014F_F01_BE403803Ta16P025H01P012G071F1_005.ab1   313 
  389  C UCD014R_F01_BE403803Ta16P025H01P012G071R1_005.ab1   100 
  401    UCD014F_F01_BE403803Ta16P025H01P012G071F1_005.ab1   345 
  437  C UCD014R_F01_BE403803Ta16P025H01P012G071R1_005.ab1    52 
  445    UCD014F_F01_BE403803Ta16P025H01P012G071F1_005.ab1   389 
  453  C UCD014R_F01_BE403803Ta16P025H01P012G071R1_005.ab1    36 
  461    UCD014F_F01_BE403803Ta16P025H01P012G071F1_005.ab1   405 
Contig length: old 568, new 568

Contig length: old 568, new 568
New start: 0