No. words: 1737; after pruning: 1685


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    
Merge:(0)    1    0.0 1.6 (1,1:-7)  317  4.96 1.18 0.95  UCD010R_C09_BE403803Ta21P025C02P012G071R1_075.ab1        1   423 (2)    UCD010F_C09_BE403803Ta21P025C02P012G071F1_075.ab1        9   432 (9) *

Pass: 1
#reads  #contigs (not counting singlets)
    1      2
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  0       1 

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 6.9 (1,1:381)  376  0.00 0.00 0.26  UCD020F_C09_BE403803Ta21P025C02P012G071F2_075.ab1        1   382 (51)  C UCD020R_C09_BE403803Ta21P025C02P012G071R2_075.ab1   (57)   381     1 *
Merge:(0)   87    0.0 5.6 (2,2:-15)  327  0.89 0.00 0.00  UCD010F_C09_BE403803Ta21P025C02P012G071F1_075.ab1        1   338 (103)  C UCD020R_C09_BE403803Ta21P025C02P012G071R2_075.ab1   (64)   374    37  

Pass: 3
#reads  #contigs (not counting singlets)
    4      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       2        0

Gap   # merges  # failures
 size
 0       1        0
87       1        0

Offset
  0       2 
  1       3 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    4      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    4    1

Chimera merges: 


Contig 1:  956 nodes

 189 str. conn. components

Path
    1  C UCD020R_C09_BE403803Ta21P025C02P012G071R2_075.ab1   438 
   84    UCD010F_C09_BE403803Ta21P025C02P012G071F1_075.ab1    20 
   88  C UCD020R_C09_BE403803Ta21P025C02P012G071R2_075.ab1   351 
  116    UCD010F_C09_BE403803Ta21P025C02P012G071F1_075.ab1    52 
  124  C UCD020R_C09_BE403803Ta21P025C02P012G071R2_075.ab1   315 
  130    UCD020F_C09_BE403803Ta21P025C02P012G071F2_075.ab1    73 
  132  C UCD020R_C09_BE403803Ta21P025C02P012G071R2_075.ab1   307 
  152    UCD010F_C09_BE403803Ta21P025C02P012G071F1_075.ab1    88 
  156  C UCD020R_C09_BE403803Ta21P025C02P012G071R2_075.ab1   283 
  160    UCD010F_C09_BE403803Ta21P025C02P012G071F1_075.ab1    96 
  172    UCD020F_C09_BE403803Ta21P025C02P012G071F2_075.ab1   115 
  174  C UCD020R_C09_BE403803Ta21P025C02P012G071R2_075.ab1   265 
  176    UCD010F_C09_BE403803Ta21P025C02P012G071F1_075.ab1   112 
  192  C UCD020R_C09_BE403803Ta21P025C02P012G071R2_075.ab1   247 
  208    UCD020F_C09_BE403803Ta21P025C02P012G071F2_075.ab1   151 
  210  C UCD020R_C09_BE403803Ta21P025C02P012G071R2_075.ab1   229 
  224    UCD010F_C09_BE403803Ta21P025C02P012G071F1_075.ab1   160 
  228  C UCD020R_C09_BE403803Ta21P025C02P012G071R2_075.ab1   211 
  236    UCD010R_C09_BE403803Ta21P025C02P012G071R1_075.ab1   164 
  244    UCD010F_C09_BE403803Ta21P025C02P012G071F1_075.ab1   180 
  260  C UCD020R_C09_BE403803Ta21P025C02P012G071R2_075.ab1   179 
  274    UCD020F_C09_BE403803Ta21P025C02P012G071F2_075.ab1   217 
  280    UCD010R_C09_BE403803Ta21P025C02P012G071R1_075.ab1   208 
  284    UCD020F_C09_BE403803Ta21P025C02P012G071F2_075.ab1   227 
  288  C UCD020R_C09_BE403803Ta21P025C02P012G071R2_075.ab1   151 
  290    UCD020F_C09_BE403803Ta21P025C02P012G071F2_075.ab1   233 
  292  C UCD020R_C09_BE403803Ta21P025C02P012G071R2_075.ab1   147 
  294    UCD020F_C09_BE403803Ta21P025C02P012G071F2_075.ab1   237 
  298  C UCD020R_C09_BE403803Ta21P025C02P012G071R2_075.ab1   141 
  302    UCD020F_C09_BE403803Ta21P025C02P012G071F2_075.ab1   245 
  306  C UCD020R_C09_BE403803Ta21P025C02P012G071R2_075.ab1   133 
  308    UCD020F_C09_BE403803Ta21P025C02P012G071F2_075.ab1   251 
  332  C UCD020R_C09_BE403803Ta21P025C02P012G071R2_075.ab1   107 
  334    UCD020F_C09_BE403803Ta21P025C02P012G071F2_075.ab1   277 
  358  C UCD020R_C09_BE403803Ta21P025C02P012G071R2_075.ab1    81 
  378    UCD020F_C09_BE403803Ta21P025C02P012G071F2_075.ab1   321 
  390  C UCD020R_C09_BE403803Ta21P025C02P012G071R2_075.ab1    49 
  394    UCD020F_C09_BE403803Ta21P025C02P012G071F2_075.ab1   337 
  414  C UCD020R_C09_BE403803Ta21P025C02P012G071R2_075.ab1    25 
  422    UCD020F_C09_BE403803Ta21P025C02P012G071F2_075.ab1   365 
Contig length: old 505, new 490

Contig length: old 490, new 490
New start: 0