No. words: 779; after pruning: 753


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 5.5 (1,1:427)  263  1.09 0.00 0.00  UCD014F_B03_BE403803Td06P025H01P012G071F1_029.ab1        1   274 (0)  C UCD014R_B03_BE403803Td06P025H01P012G071R1_029.ab1   (77)   428   155 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  130 nodes

 67 str. conn. components

Path
    1  C UCD014R_B03_BE403803Td06P025H01P012G071R1_029.ab1   505 
Contig length: old 505, new 505

Contig length: old 505, new 505
New start: 0