No. words: 2695; after pruning: 2643 Histogram of relative pair offsets, for read pairs with multiple alignments: Pass 1 Gap Score Pass: 1 #reads #contigs (not counting singlets) 1 4 N.B. Following not based on all pairs!! Lowest # merges # failures LLR score Gap # merges # failures size Offset Pass 3 Gap Score Merge:(0) 0 0.0 12.0 (1,1:1194) 526 0.00 0.00 0.00 UCD020F_A03_BE405604Ta17P001C05P001C111F2_031.ab1 316 858 (0) C UCD020R_A03_BE405604Ta17P001C05P001C111R2_031.ab1 (0) 880 338 * -630 -1183 0 11 360 E -359- 0 Fail: (1) 360 0.0 3.1 (2,1:1183) 232 2.60 0.74 0.00 UCD020F_A03_BE405604Ta17P001C05P001C111F2_031.ab1 555 823 (35) C UCD010F_A03_BE405604Ta17P001C05P001C111F1_031.ab1 (0) 631 361 Pass: 3 #reads #contigs (not counting singlets) 1 2 2 1 N.B. Following not based on all pairs!! Lowest # merges # failures LLR score 0.0 1 1 Gap # merges # failures size 0 1 0 360 0 1 Offset 0 2 1 1 Pass 4 Gap Score Merge:(0) 0 0.0 6.9 (2,1:1199) 306 0.00 0.31 0.00 UCD020R_A03_BE405604Ta17P001C05P001C111R2_031.ab1 1 321 (559) UCD010R_A03_BE405604Ta17P001C05P001C111R1_031.ab1 5 326 (0) * 0 -3 630 1196 290 E 341- 630 Fail: (1) 290 0.0 5.8 (3,1:3) 319 1.47 0.00 0.00 UCD020F_A03_BE405604Ta17P001C05P001C111F2_031.ab1 4 344 (514) UCD010F_A03_BE405604Ta17P001C05P001C111F1_031.ab1 1 341 (290) -630 -1183 0 16 360 E -359- 0 Fail: (1) 360 0.0 3.1 (3,1:1183) 232 2.60 0.74 0.00 UCD020F_A03_BE405604Ta17P001C05P001C111F2_031.ab1 555 823 (35) C UCD010F_A03_BE405604Ta17P001C05P001C111F1_031.ab1 (0) 631 361 Pass: 4 #reads #contigs (not counting singlets) 1 1 3 1 N.B. Following not based on all pairs!! Lowest # merges # failures LLR score 0.0 1 2 Gap # merges # failures size 0 1 0 290 0 1 360 0 1 Offset 0 3 1 1 Read equivalence class histogram: 1 1 3 1 Chimera merges: Merge:(0) 290 0.0 6.6 (3,1:3) 319 1.47 0.00 0.00 UCD020F_A03_BE405604Ta17P001C05P001C111F2_031.ab1 4 344 (514) UCD010F_A03_BE405604Ta17P001C05P001C111F1_031.ab1 1 341 (290) Contig 1: 584 nodes 296 str. conn. components Path 1 UCD020F_A03_BE405604Ta17P001C05P001C111F2_031.ab1 1 27 UCD010F_A03_BE405604Ta17P001C05P001C111F1_031.ab1 24 39 UCD020F_A03_BE405604Ta17P001C05P001C111F2_031.ab1 39 59 UCD010F_A03_BE405604Ta17P001C05P001C111F1_031.ab1 56 63 UCD020F_A03_BE405604Ta17P001C05P001C111F2_031.ab1 63 79 UCD010F_A03_BE405604Ta17P001C05P001C111F1_031.ab1 76 99 UCD020F_A03_BE405604Ta17P001C05P001C111F2_031.ab1 99 107 UCD010F_A03_BE405604Ta17P001C05P001C111F1_031.ab1 104 227 UCD020F_A03_BE405604Ta17P001C05P001C111F2_031.ab1 227 599 C UCD020R_A03_BE405604Ta17P001C05P001C111R2_031.ab1 597 603 UCD020F_A03_BE405604Ta17P001C05P001C111F2_031.ab1 603 611 C UCD020R_A03_BE405604Ta17P001C05P001C111R2_031.ab1 585 615 UCD020F_A03_BE405604Ta17P001C05P001C111F2_031.ab1 615 627 C UCD020R_A03_BE405604Ta17P001C05P001C111R2_031.ab1 569 659 UCD020F_A03_BE405604Ta17P001C05P001C111F2_031.ab1 659 663 C UCD020R_A03_BE405604Ta17P001C05P001C111R2_031.ab1 533 787 UCD020F_A03_BE405604Ta17P001C05P001C111F2_031.ab1 787 791 C UCD020R_A03_BE405604Ta17P001C05P001C111R2_031.ab1 405 933 C UCD010R_A03_BE405604Ta17P001C05P001C111R1_031.ab1 268 1009 C UCD020R_A03_BE405604Ta17P001C05P001C111R2_031.ab1 187 1025 C UCD010R_A03_BE405604Ta17P001C05P001C111R1_031.ab1 176 1073 C UCD020R_A03_BE405604Ta17P001C05P001C111R2_031.ab1 123 1081 C UCD010R_A03_BE405604Ta17P001C05P001C111R1_031.ab1 120 1089 C UCD020R_A03_BE405604Ta17P001C05P001C111R2_031.ab1 107 1093 C UCD010R_A03_BE405604Ta17P001C05P001C111R1_031.ab1 108 1121 C UCD020R_A03_BE405604Ta17P001C05P001C111R2_031.ab1 75 1129 C UCD010R_A03_BE405604Ta17P001C05P001C111R1_031.ab1 72 1145 C UCD020R_A03_BE405604Ta17P001C05P001C111R2_031.ab1 51 1165 C UCD010R_A03_BE405604Ta17P001C05P001C111R1_031.ab1 36 1169 C UCD020R_A03_BE405604Ta17P001C05P001C111R2_031.ab1 27 1177 C UCD010R_A03_BE405604Ta17P001C05P001C111R1_031.ab1 24 Contig length: old 1200, new 1200 Contig length: old 1200, new 1200 New start: 0