No. words: 1135; after pruning: 1109


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.5 (1,1:632)  427  0.45 0.00 0.00  UCD007F_C12_BE406277AS02P012E06P001E121F1_092.ab1      189   633 (57)  C UCD007R_C12_BE406277AS02P012E06P001E121R1_092.ab1   (0)   445     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  218 nodes

 111 str. conn. components

Path
    1    UCD007F_C12_BE406277AS02P012E06P001E121F1_092.ab1     1 
  348  C UCD007R_C12_BE406277AS02P012E06P001E121R1_092.ab1   286 
  356    UCD007F_C12_BE406277AS02P012E06P001E121F1_092.ab1   356 
  368  C UCD007R_C12_BE406277AS02P012E06P001E121R1_092.ab1   266 
  376    UCD007F_C12_BE406277AS02P012E06P001E121F1_092.ab1   376 
  384  C UCD007R_C12_BE406277AS02P012E06P001E121R1_092.ab1   250 
  388    UCD007F_C12_BE406277AS02P012E06P001E121F1_092.ab1   388 
  392  C UCD007R_C12_BE406277AS02P012E06P001E121R1_092.ab1   242 
  400    UCD007F_C12_BE406277AS02P012E06P001E121F1_092.ab1   400 
  404  C UCD007R_C12_BE406277AS02P012E06P001E121R1_092.ab1   230 
  424    UCD007F_C12_BE406277AS02P012E06P001E121F1_092.ab1   424 
  428  C UCD007R_C12_BE406277AS02P012E06P001E121R1_092.ab1   206 
  464    UCD007F_C12_BE406277AS02P012E06P001E121F1_092.ab1   464 
  468  C UCD007R_C12_BE406277AS02P012E06P001E121R1_092.ab1   166 
  608    UCD007F_C12_BE406277AS02P012E06P001E121F1_092.ab1   608 
  622  C UCD007R_C12_BE406277AS02P012E06P001E121R1_092.ab1    12 
  630    UCD007F_C12_BE406277AS02P012E06P001E121F1_092.ab1   630 
Contig length: old 690, new 690

Contig length: old 690, new 690
New start: 0