No. words: 1530; after pruning: 1504


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 13.2 (1,1:617)  615  0.00 0.00 0.00  UCD024F_D06_BE426083LD08P028C05P028C111F1_042.ab1        1   617 (93)  C UCD024R_D06_BE426083LD08P028C05P028C111R1_042.ab1   (202)   618     2 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  310 nodes

 157 str. conn. components

Path
    1  C UCD024R_D06_BE426083LD08P028C05P028C111R1_042.ab1   820 
  222    UCD024F_D06_BE426083LD08P028C05P028C111F1_042.ab1    20 
  230  C UCD024R_D06_BE426083LD08P028C05P028C111R1_042.ab1   591 
  254    UCD024F_D06_BE426083LD08P028C05P028C111F1_042.ab1    52 
  258  C UCD024R_D06_BE426083LD08P028C05P028C111R1_042.ab1   563 
  326    UCD024F_D06_BE426083LD08P028C05P028C111F1_042.ab1   124 
  338  C UCD024R_D06_BE426083LD08P028C05P028C111R1_042.ab1   483 
  350    UCD024F_D06_BE426083LD08P028C05P028C111F1_042.ab1   148 
  426  C UCD024R_D06_BE426083LD08P028C05P028C111R1_042.ab1   395 
  718    UCD024F_D06_BE426083LD08P028C05P028C111F1_042.ab1   516 
  722  C UCD024R_D06_BE426083LD08P028C05P028C111R1_042.ab1    99 
  746    UCD024F_D06_BE426083LD08P028C05P028C111F1_042.ab1   544 
  754  C UCD024R_D06_BE426083LD08P028C05P028C111R1_042.ab1    67 
  762    UCD024F_D06_BE426083LD08P028C05P028C111F1_042.ab1   560 
  766  C UCD024R_D06_BE426083LD08P028C05P028C111R1_042.ab1    55 
  814    UCD024F_D06_BE426083LD08P028C05P028C111F1_042.ab1   612 
Contig length: old 912, new 912

Contig length: old 912, new 912
New start: 0