No. words: 431; after pruning: 405


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 2.5 (1,1:-105)  129  2.82 0.00 0.00  UCD030F_F12_BE442788Sn24P036C04P036C071F1_086.ab1        1   142 (0)    UCD030R_F12_BE442788Sn24P036C04P036C071R1_086.ab1      106   247 (42) *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  62 nodes

 33 str. conn. components

Path
    1    UCD030R_F12_BE442788Sn24P036C04P036C071R1_086.ab1     1 
Contig length: old 289, new 289

Contig length: old 289, new 289
New start: 0