No. words: 468; after pruning: 442


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 2.2 (1,1:-123)  154  2.92 0.00 0.00  UCD031F_C01_BE442788Sn31P036C04P036C071F1_011.ab1        1   171 (3)    UCD031R_C01_BE442788Sn31P036C04P036C071R1_011.ab1      124   294 (0) *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  74 nodes

 39 str. conn. components

Path
    1    UCD031R_C01_BE442788Sn31P036C04P036C071R1_011.ab1     1 
Contig length: old 297, new 294

Contig length: old 294, new 294
New start: 0