No. words: 514; after pruning: 488


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 3.7 (1,1:-50)  182  4.42 0.44 0.88  UCD030F_D11_BE442788Ta14P036C04P036C071F1_089.ab1        1   226 (0)    UCD030R_D11_BE442788Ta14P036C04P036C071R1_089.ab1       52   276 (12) *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  94 nodes

 49 str. conn. components

Path
    1    UCD030R_D11_BE442788Ta14P036C04P036C071R1_089.ab1     1 
Contig length: old 288, new 288

Contig length: old 288, new 288
New start: 0