No. words: 502; after pruning: 476


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 1.9 (1,1:-94)  175  3.09 0.00 0.00  UCD030F_E11_BE442788Ta15P036C04P036C071F1_087.ab1        1   194 (20)    UCD030R_E11_BE442788Ta15P036C04P036C071R1_087.ab1       95   288 (0) *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  84 nodes

 44 str. conn. components

Path
    1    UCD030R_E11_BE442788Ta15P036C04P036C071R1_087.ab1     1 
  282    UCD030F_E11_BE442788Ta15P036C04P036C071F1_087.ab1   188 
Contig length: old 308, new 308

Contig length: old 308, new 308
New start: 0