No. words: 486; after pruning: 460


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    

Pass: 3
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 4
             Gap  Score    
Merge:(0)    0   -0.1 -0.1 (1,1:-120)  131  6.94 0.00 0.58  UCD030F_F11_BE442788Ta16P036C04P036C071F1_085.ab1        1   173 (20)    UCD030R_F11_BE442788Ta16P036C04P036C071R1_085.ab1      122   293 (0) *

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
-0.1       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Read equivalence class histogram:
    1    2

Chimera merges: 


Contig 1:  54 nodes

 29 str. conn. components

Path
    1    UCD030R_F11_BE442788Ta16P036C04P036C071R1_085.ab1     1 
Contig length: old 313, new 293

Contig length: old 293, new 293
New start: 0