No. words: 458; after pruning: 432


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    3    0.0 1.9 (1,1:-125)  139  3.12 0.00 0.62  UCD030F_H11_BE442788Ta18P036C04P036C071F1_081.ab1        1   160 (3)    UCD030R_H11_BE442788Ta18P036C04P036C071R1_081.ab1      127   285 (10) *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 3       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  64 nodes

 34 str. conn. components

Path
    1    UCD030R_H11_BE442788Ta18P036C04P036C071R1_081.ab1     1 
Contig length: old 295, new 295

Contig length: old 295, new 295
New start: 0