No. words: 720; after pruning: 680 Histogram of relative pair offsets, for read pairs with multiple alignments: Pass 1 Gap Score Pass: 1 #reads #contigs (not counting singlets) 1 2 N.B. Following not based on all pairs!! Lowest # merges # failures LLR score Gap # merges # failures size Offset Pass 3 Gap Score Merge:(0) 0 0.0 5.5 (1,1:248) 248 0.00 0.00 0.00 UCD032F_A01_BE442788Ta23P012C04P036D071F1_015.ab1 1 249 (87) C UCD032R_A01_BE442788Ta23P012C04P036D071R1_015.ab1 (135) 249 1 * Pass: 3 #reads #contigs (not counting singlets) 2 1 N.B. Following not based on all pairs!! Lowest # merges # failures LLR score 0.0 1 0 Gap # merges # failures size 0 1 0 Offset 0 1 Pass 4 Gap Score Pass: 4 #reads #contigs (not counting singlets) 2 1 N.B. Following not based on all pairs!! Lowest # merges # failures LLR score Gap # merges # failures size Offset Read equivalence class histogram: 2 1 Chimera merges: Contig 1: 126 nodes 65 str. conn. components Path 1 C UCD032R_A01_BE442788Ta23P012C04P036D071R1_015.ab1 384 267 UCD032F_A01_BE442788Ta23P012C04P036D071F1_015.ab1 132 271 C UCD032R_A01_BE442788Ta23P012C04P036D071R1_015.ab1 114 275 UCD032F_A01_BE442788Ta23P012C04P036D071F1_015.ab1 140 279 C UCD032R_A01_BE442788Ta23P012C04P036D071R1_015.ab1 106 311 UCD032F_A01_BE442788Ta23P012C04P036D071F1_015.ab1 176 323 C UCD032R_A01_BE442788Ta23P012C04P036D071R1_015.ab1 62 327 UCD032F_A01_BE442788Ta23P012C04P036D071F1_015.ab1 192 343 C UCD032R_A01_BE442788Ta23P012C04P036D071R1_015.ab1 42 347 UCD032F_A01_BE442788Ta23P012C04P036D071F1_015.ab1 212 363 C UCD032R_A01_BE442788Ta23P012C04P036D071R1_015.ab1 22 367 UCD032F_A01_BE442788Ta23P012C04P036D071F1_015.ab1 232 Contig length: old 471, new 471 Contig length: old 471, new 471 New start: 0 S Change at: 53; seg lengths: entry 1, contig 1