No. words: 492; after pruning: 466


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 1.6 (1,1:-107)  157  4.40 0.00 0.00  UCD030F_E12_BE442788Ta23P036C04P036C071F1_088.ab1        1   182 (21)    UCD030R_E12_BE442788Ta23P036C04P036C071R1_088.ab1      108   289 (0) *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  72 nodes

 38 str. conn. components

Path
    1    UCD030R_E12_BE442788Ta23P036C04P036C071R1_088.ab1     1 
  283    UCD030F_E12_BE442788Ta23P036C04P036C071F1_088.ab1   176 
Contig length: old 310, new 310

Contig length: old 310, new 310
New start: 0