No. words: 451; after pruning: 425


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    

Pass: 3
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 4
             Gap  Score    
Merge:(0)    0   -0.7 -0.7 (1,1:-121)  107 10.69 0.00 0.00  UCD030F_G09_BE442788Td01P036C04P036C071F1_067.ab1        1   159 (0)    UCD030R_G09_BE442788Td01P036C04P036C071R1_067.ab1      122   280 (12) *

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
-0.7       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Read equivalence class histogram:
    1    2

Chimera merges: 


Contig 1:  48 nodes

 26 str. conn. components

Path
    1    UCD030R_G09_BE442788Td01P036C04P036C071R1_067.ab1     1 
Contig length: old 292, new 292

Contig length: old 292, new 292
New start: 0