No. words: 422; after pruning: 396


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 2.0 (1,1:-138)  114  5.11 0.00 0.00  UCD030F_A10_BE442788Td03P036C04P036C071F1_080.ab1        1   137 (10)    UCD030R_A10_BE442788Td03P036C04P036C071R1_080.ab1      139   275 (0) *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  50 nodes

 27 str. conn. components

Path
    1    UCD030R_A10_BE442788Td03P036C04P036C071R1_080.ab1     1 
Contig length: old 285, new 275

Contig length: old 275, new 275
New start: 0