No. words: 949; after pruning: 923


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 6.2 (1,1:313)  302  0.00 0.64 0.00  UCD016F_D12_BE443112LD10P028D03D091F1_090.ab1        1   313 (182)  C UCD016R_D12_BE443112LD10P028D03D091R1_090.ab1   (139)   315     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  152 nodes

 78 str. conn. components

Path
    1  C UCD016R_D12_BE443112LD10P028D03D091R1_090.ab1   454 
  345    UCD016F_D12_BE443112LD10P028D03D091F1_090.ab1   204 
Contig length: old 635, new 636

Contig length: old 636, new 636
New start: 0