No. words: 1428; after pruning: 1402


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.7 (1,1:581)  565  0.00 0.00 0.34  UCD024F_E07_BE444541LD01P028F03P028F091F1_055.ab1        1   583 (145)  C UCD024R_E07_BE444541LD01P028F03P028F091R1_055.ab1   (119)   581     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  286 nodes

 145 str. conn. components

Path
    1  C UCD024R_E07_BE444541LD01P028F03P028F091R1_055.ab1   700 
  126    UCD024F_E07_BE444541LD01P028F03P028F091F1_055.ab1     7 
  130  C UCD024R_E07_BE444541LD01P028F03P028F091R1_055.ab1   571 
  138    UCD024F_E07_BE444541LD01P028F03P028F091F1_055.ab1    19 
  166  C UCD024R_E07_BE444541LD01P028F03P028F091R1_055.ab1   535 
  170    UCD024F_E07_BE444541LD01P028F03P028F091F1_055.ab1    51 
  178  C UCD024R_E07_BE444541LD01P028F03P028F091R1_055.ab1   523 
  186    UCD024F_E07_BE444541LD01P028F03P028F091F1_055.ab1    67 
  206  C UCD024R_E07_BE444541LD01P028F03P028F091R1_055.ab1   495 
  214    UCD024F_E07_BE444541LD01P028F03P028F091F1_055.ab1    95 
  254  C UCD024R_E07_BE444541LD01P028F03P028F091R1_055.ab1   447 
  258    UCD024F_E07_BE444541LD01P028F03P028F091F1_055.ab1   139 
  450  C UCD024R_E07_BE444541LD01P028F03P028F091R1_055.ab1   251 
  490    UCD024F_E07_BE444541LD01P028F03P028F091F1_055.ab1   371 
  498  C UCD024R_E07_BE444541LD01P028F03P028F091R1_055.ab1   203 
  558    UCD024F_E07_BE444541LD01P028F03P028F091F1_055.ab1   439 
  562  C UCD024R_E07_BE444541LD01P028F03P028F091R1_055.ab1   139 
  602    UCD024F_E07_BE444541LD01P028F03P028F091F1_055.ab1   483 
  606  C UCD024R_E07_BE444541LD01P028F03P028F091R1_055.ab1    95 
  614    UCD024F_E07_BE444541LD01P028F03P028F091F1_055.ab1   495 
  618  C UCD024R_E07_BE444541LD01P028F03P028F091R1_055.ab1    83 
  626    UCD024F_E07_BE444541LD01P028F03P028F091F1_055.ab1   507 
  634  C UCD024R_E07_BE444541LD01P028F03P028F091R1_055.ab1    67 
  638    UCD024F_E07_BE444541LD01P028F03P028F091F1_055.ab1   519 
  642  C UCD024R_E07_BE444541LD01P028F03P028F091R1_055.ab1    59 
  646    UCD024F_E07_BE444541LD01P028F03P028F091F1_055.ab1   527 
  654  C UCD024R_E07_BE444541LD01P028F03P028F091R1_055.ab1    47 
  666    UCD024F_E07_BE444541LD01P028F03P028F091F1_055.ab1   547 
  689  C UCD024R_E07_BE444541LD01P028F03P028F091R1_055.ab1    14 
  693    UCD024F_E07_BE444541LD01P028F03P028F091F1_055.ab1   574 
Contig length: old 846, new 847

Contig length: old 847, new 847
New start: 0