No. words: 1306; after pruning: 1280


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 11.3 (1,1:594)  574  0.00 0.00 0.34  UCD024F_G06_BE444541TU01P028F03P028F091F1_036.ab1        1   596 (47)  C UCD024R_G06_BE444541TU01P028F03P028F091R1_036.ab1   (69)   594     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  292 nodes

 148 str. conn. components

Path
    1  C UCD024R_G06_BE444541TU01P028F03P028F091R1_036.ab1   663 
   90    UCD024F_G06_BE444541TU01P028F03P028F091F1_036.ab1    21 
   98  C UCD024R_G06_BE444541TU01P028F03P028F091R1_036.ab1   566 
  122    UCD024F_G06_BE444541TU01P028F03P028F091F1_036.ab1    53 
  142  C UCD024R_G06_BE444541TU01P028F03P028F091R1_036.ab1   522 
  162    UCD024F_G06_BE444541TU01P028F03P028F091F1_036.ab1    93 
  166  C UCD024R_G06_BE444541TU01P028F03P028F091R1_036.ab1   498 
  174    UCD024F_G06_BE444541TU01P028F03P028F091F1_036.ab1   105 
  186  C UCD024R_G06_BE444541TU01P028F03P028F091R1_036.ab1   478 
  198    UCD024F_G06_BE444541TU01P028F03P028F091F1_036.ab1   129 
  234  C UCD024R_G06_BE444541TU01P028F03P028F091R1_036.ab1   430 
  242    UCD024F_G06_BE444541TU01P028F03P028F091F1_036.ab1   173 
  254  C UCD024R_G06_BE444541TU01P028F03P028F091R1_036.ab1   410 
  270    UCD024F_G06_BE444541TU01P028F03P028F091F1_036.ab1   201 
  294  C UCD024R_G06_BE444541TU01P028F03P028F091R1_036.ab1   370 
  318    UCD024F_G06_BE444541TU01P028F03P028F091F1_036.ab1   249 
  346  C UCD024R_G06_BE444541TU01P028F03P028F091R1_036.ab1   318 
  350    UCD024F_G06_BE444541TU01P028F03P028F091F1_036.ab1   281 
  358  C UCD024R_G06_BE444541TU01P028F03P028F091R1_036.ab1   306 
  370    UCD024F_G06_BE444541TU01P028F03P028F091F1_036.ab1   301 
  470  C UCD024R_G06_BE444541TU01P028F03P028F091R1_036.ab1   194 
  478    UCD024F_G06_BE444541TU01P028F03P028F091F1_036.ab1   409 
  498  C UCD024R_G06_BE444541TU01P028F03P028F091R1_036.ab1   166 
  506    UCD024F_G06_BE444541TU01P028F03P028F091F1_036.ab1   437 
  538  C UCD024R_G06_BE444541TU01P028F03P028F091R1_036.ab1   126 
  578    UCD024F_G06_BE444541TU01P028F03P028F091F1_036.ab1   509 
  590  C UCD024R_G06_BE444541TU01P028F03P028F091R1_036.ab1    74 
  602    UCD024F_G06_BE444541TU01P028F03P028F091F1_036.ab1   533 
  610  C UCD024R_G06_BE444541TU01P028F03P028F091R1_036.ab1    54 
  618    UCD024F_G06_BE444541TU01P028F03P028F091F1_036.ab1   549 
  626  C UCD024R_G06_BE444541TU01P028F03P028F091R1_036.ab1    38 
  630    UCD024F_G06_BE444541TU01P028F03P028F091F1_036.ab1   561 
  634  C UCD024R_G06_BE444541TU01P028F03P028F091R1_036.ab1    30 
  638    UCD024F_G06_BE444541TU01P028F03P028F091F1_036.ab1   569 
  647  C UCD024R_G06_BE444541TU01P028F03P028F091R1_036.ab1    18 
  651    UCD024F_G06_BE444541TU01P028F03P028F091F1_036.ab1   582 
Contig length: old 711, new 712

Contig length: old 712, new 712
New start: 0