No. words: 693; after pruning: 667


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    

Pass: 3
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 4
             Gap  Score    
Merge:(0)    0   -2.4 -2.4 (1,1:-124)  147 11.35 0.00 0.00  UCD003F_D11_BE444599LD02P001H06H121F1_090.ab1        1   229 (0)    UCD003R_D11_BE444599LD02P001H06H121R1_090.ab1      125   353 (111) *

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
-2.4       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Read equivalence class histogram:
    1    2

Chimera merges: 


Contig 1:  54 nodes

 29 str. conn. components

Path
    1    UCD003R_D11_BE444599LD02P001H06H121R1_090.ab1     1 
Contig length: old 464, new 464

Contig length: old 464, new 464
New start: 0