No. words: 1060; after pruning: 1034


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    

Pass: 3
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 4
             Gap  Score    
Merge:(0)    0   -0.2 -0.2 (1,1:15)  138  4.27 0.61 0.00  UCD012R_C09_BE445431Sn25P025F08P012C111R1_075.ab1       17   180 (0)    UCD022_E12_BE445431Sn25P025F08P012C111R2_088.ab1        1   165 (715) *

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
-0.2       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Read equivalence class histogram:
    1    2

Chimera merges: 


Contig 1:  64 nodes

 34 str. conn. components

Path
    1    UCD012R_C09_BE445431Sn25P025F08P012C111R1_075.ab1     1 
   43    UCD022_E12_BE445431Sn25P025F08P012C111R2_088.ab1    28 
Contig length: old 895, new 895

Contig length: old 895, new 896
New start: 0 
I Change at: 24; seg lengths: entry 1, contig 0