No. words: 1289; after pruning: 1263


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 7.8 (1,1:602)  585  0.00 0.17 0.17  UCD015F_D05_BE445431Ta18P012C05P025B091F1_041.ab1        1   603 (44)  C UCD015R_D05_BE445431Ta18P012C05P025B091R1_041.ab1   (39)   603     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  296 nodes

 150 str. conn. components

Path
    1  C UCD015R_D05_BE445431Ta18P012C05P025B091R1_041.ab1   642 
   71    UCD015F_D05_BE445431Ta18P012C05P025B091F1_041.ab1    31 
   75  C UCD015R_D05_BE445431Ta18P012C05P025B091R1_041.ab1   568 
   91    UCD015F_D05_BE445431Ta18P012C05P025B091F1_041.ab1    51 
   95  C UCD015R_D05_BE445431Ta18P012C05P025B091R1_041.ab1   548 
  139    UCD015F_D05_BE445431Ta18P012C05P025B091F1_041.ab1    99 
  147  C UCD015R_D05_BE445431Ta18P012C05P025B091R1_041.ab1   496 
  151    UCD015F_D05_BE445431Ta18P012C05P025B091F1_041.ab1   111 
  159  C UCD015R_D05_BE445431Ta18P012C05P025B091R1_041.ab1   484 
  163    UCD015F_D05_BE445431Ta18P012C05P025B091F1_041.ab1   123 
  167  C UCD015R_D05_BE445431Ta18P012C05P025B091R1_041.ab1   476 
  211    UCD015F_D05_BE445431Ta18P012C05P025B091F1_041.ab1   171 
  279  C UCD015R_D05_BE445431Ta18P012C05P025B091R1_041.ab1   364 
  299    UCD015F_D05_BE445431Ta18P012C05P025B091F1_041.ab1   259 
  331  C UCD015R_D05_BE445431Ta18P012C05P025B091R1_041.ab1   312 
  383    UCD015F_D05_BE445431Ta18P012C05P025B091F1_041.ab1   343 
  431  C UCD015R_D05_BE445431Ta18P012C05P025B091R1_041.ab1   212 
  487    UCD015F_D05_BE445431Ta18P012C05P025B091F1_041.ab1   447 
  495  C UCD015R_D05_BE445431Ta18P012C05P025B091R1_041.ab1   148 
  503    UCD015F_D05_BE445431Ta18P012C05P025B091F1_041.ab1   463 
  507  C UCD015R_D05_BE445431Ta18P012C05P025B091R1_041.ab1   136 
  535    UCD015F_D05_BE445431Ta18P012C05P025B091F1_041.ab1   495 
  547  C UCD015R_D05_BE445431Ta18P012C05P025B091R1_041.ab1    96 
  555    UCD015F_D05_BE445431Ta18P012C05P025B091F1_041.ab1   515 
  559  C UCD015R_D05_BE445431Ta18P012C05P025B091R1_041.ab1    84 
  583    UCD015F_D05_BE445431Ta18P012C05P025B091F1_041.ab1   543 
  587  C UCD015R_D05_BE445431Ta18P012C05P025B091R1_041.ab1    56 
  591    UCD015F_D05_BE445431Ta18P012C05P025B091F1_041.ab1   551 
  595  C UCD015R_D05_BE445431Ta18P012C05P025B091R1_041.ab1    48 
  603    UCD015F_D05_BE445431Ta18P012C05P025B091F1_041.ab1   563 
Contig length: old 686, new 687

Contig length: old 687, new 687
New start: 0