No. words: 1285; after pruning: 1259


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.6 (1,1:592)  571  0.00 0.17 0.34  UCD015F_F05_BE445431Ta20P012C05P025B091F1_037.ab1        1   594 (47)  C UCD015R_F05_BE445431Ta20P012C05P025B091R1_037.ab1   (51)   593     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  290 nodes

 147 str. conn. components

Path
    1  C UCD015R_F05_BE445431Ta20P012C05P025B091R1_037.ab1   644 
   91    UCD015F_F05_BE445431Ta20P012C05P025B091F1_037.ab1    39 
   99  C UCD015R_F05_BE445431Ta20P012C05P025B091R1_037.ab1   546 
  155    UCD015F_F05_BE445431Ta20P012C05P025B091F1_037.ab1   103 
  183  C UCD015R_F05_BE445431Ta20P012C05P025B091R1_037.ab1   462 
  215    UCD015F_F05_BE445431Ta20P012C05P025B091F1_037.ab1   163 
  279  C UCD015R_F05_BE445431Ta20P012C05P025B091R1_037.ab1   366 
  303    UCD015F_F05_BE445431Ta20P012C05P025B091F1_037.ab1   251 
  335  C UCD015R_F05_BE445431Ta20P012C05P025B091R1_037.ab1   310 
  395    UCD015F_F05_BE445431Ta20P012C05P025B091F1_037.ab1   343 
  427  C UCD015R_F05_BE445431Ta20P012C05P025B091R1_037.ab1   218 
  507    UCD015F_F05_BE445431Ta20P012C05P025B091F1_037.ab1   455 
  511  C UCD015R_F05_BE445431Ta20P012C05P025B091R1_037.ab1   134 
  539    UCD015F_F05_BE445431Ta20P012C05P025B091F1_037.ab1   487 
  547  C UCD015R_F05_BE445431Ta20P012C05P025B091R1_037.ab1    98 
  571    UCD015F_F05_BE445431Ta20P012C05P025B091F1_037.ab1   519 
  575  C UCD015R_F05_BE445431Ta20P012C05P025B091R1_037.ab1    70 
  607    UCD015F_F05_BE445431Ta20P012C05P025B091F1_037.ab1   555 
  611  C UCD015R_F05_BE445431Ta20P012C05P025B091R1_037.ab1    34 
  615    UCD015F_F05_BE445431Ta20P012C05P025B091F1_037.ab1   563 
  629  C UCD015R_F05_BE445431Ta20P012C05P025B091R1_037.ab1    17 
  637    UCD015F_F05_BE445431Ta20P012C05P025B091F1_037.ab1   585 
Contig length: old 692, new 693

Contig length: old 693, new 693
New start: 0