No. words: 1071; after pruning: 1045


Histogram of relative pair offsets, for read pairs with multiple alignments:
 0     2

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.5 (1,1:641)  411  0.00 0.00 0.00  UCD023F_G08_BE446480LD01P028F05P028F111F1_052.ab1      108   536 (0)  C UCD023R_G08_BE446480LD01P028F05P028F111R1_052.ab1   (0)   535   107 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  216 nodes

 110 str. conn. components

Path
    1    UCD023F_G08_BE446480LD01P028F05P028F111F1_052.ab1     1 
  307  C UCD023R_G08_BE446480LD01P028F05P028F111R1_052.ab1   336 
  335    UCD023F_G08_BE446480LD01P028F05P028F111F1_052.ab1   335 
  355  C UCD023R_G08_BE446480LD01P028F05P028F111R1_052.ab1   288 
Contig length: old 642, new 642

Contig length: old 642, new 642
New start: 0