No. words: 1270; after pruning: 1244


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    4    0.0 8.6 (1,1:472)  446  0.00 0.21 0.00  UCD023F_H08_BE446480LD02P028F05P028F111F1_050.ab1        6   473 (148)  C UCD023R_H08_BE446480LD02P028F05P028F111R1_050.ab1   (180)   469     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 4       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  232 nodes

 118 str. conn. components

Path
    1  C UCD023R_H08_BE446480LD02P028F05P028F111R1_050.ab1   649 
  231    UCD023F_H08_BE446480LD02P028F05P028F111F1_050.ab1    55 
  271  C UCD023R_H08_BE446480LD02P028F05P028F111R1_050.ab1   379 
  295    UCD023F_H08_BE446480LD02P028F05P028F111F1_050.ab1   119 
  387  C UCD023R_H08_BE446480LD02P028F05P028F111R1_050.ab1   263 
  411    UCD023F_H08_BE446480LD02P028F05P028F111F1_050.ab1   235 
  479  C UCD023R_H08_BE446480LD02P028F05P028F111R1_050.ab1   171 
  531    UCD023F_H08_BE446480LD02P028F05P028F111F1_050.ab1   355 
  555  C UCD023R_H08_BE446480LD02P028F05P028F111R1_050.ab1    95 
  559    UCD023F_H08_BE446480LD02P028F05P028F111F1_050.ab1   383 
  567  C UCD023R_H08_BE446480LD02P028F05P028F111R1_050.ab1    83 
  583    UCD023F_H08_BE446480LD02P028F05P028F111F1_050.ab1   407 
  587  C UCD023R_H08_BE446480LD02P028F05P028F111R1_050.ab1    63 
  591    UCD023F_H08_BE446480LD02P028F05P028F111F1_050.ab1   415 
  603  C UCD023R_H08_BE446480LD02P028F05P028F111R1_050.ab1    47 
  607    UCD023F_H08_BE446480LD02P028F05P028F111F1_050.ab1   431 
Contig length: old 797, new 797

Contig length: old 797, new 797
New start: 0