No. words: 1551; after pruning: 1497


Histogram of relative pair offsets, for read pairs with multiple alignments:
99     6

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 14.3 (1,1:654)  626  0.31 0.15 0.00  UCD003F_G02_BE488358LD09P001E04E101F1_008.ab1        1   655 (152)  C UCD003R_G02_BE488358LD09P001E04E101R1_008.ab1   (88)   656     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  320 nodes

 162 str. conn. components

Path
    1  C UCD003R_G02_BE488358LD09P001E04E101R1_008.ab1   744 
   96    UCD003F_G02_BE488358LD09P001E04E101F1_008.ab1     8 
  171  C UCD003R_G02_BE488358LD09P001E04E101R1_008.ab1   573 
  175    UCD003F_G02_BE488358LD09P001E04E101F1_008.ab1    87 
  207  C UCD003R_G02_BE488358LD09P001E04E101R1_008.ab1   537 
  211    UCD003F_G02_BE488358LD09P001E04E101F1_008.ab1   123 
  219  C UCD003R_G02_BE488358LD09P001E04E101R1_008.ab1   525 
  223    UCD003F_G02_BE488358LD09P001E04E101F1_008.ab1   135 
  227  C UCD003R_G02_BE488358LD09P001E04E101R1_008.ab1   517 
  231    UCD003F_G02_BE488358LD09P001E04E101F1_008.ab1   143 
  239  C UCD003R_G02_BE488358LD09P001E04E101R1_008.ab1   505 
  243    UCD003F_G02_BE488358LD09P001E04E101F1_008.ab1   155 
  371  C UCD003R_G02_BE488358LD09P001E04E101R1_008.ab1   373 
  383    UCD003F_G02_BE488358LD09P001E04E101F1_008.ab1   295 
  399  C UCD003R_G02_BE488358LD09P001E04E101R1_008.ab1   345 
  403    UCD003F_G02_BE488358LD09P001E04E101F1_008.ab1   315 
  427  C UCD003R_G02_BE488358LD09P001E04E101R1_008.ab1   317 
  435    UCD003F_G02_BE488358LD09P001E04E101F1_008.ab1   347 
  439  C UCD003R_G02_BE488358LD09P001E04E101R1_008.ab1   305 
  459    UCD003F_G02_BE488358LD09P001E04E101F1_008.ab1   371 
  495  C UCD003R_G02_BE488358LD09P001E04E101R1_008.ab1   249 
  499    UCD003F_G02_BE488358LD09P001E04E101F1_008.ab1   411 
  503  C UCD003R_G02_BE488358LD09P001E04E101R1_008.ab1   241 
  523    UCD003F_G02_BE488358LD09P001E04E101F1_008.ab1   435 
  527  C UCD003R_G02_BE488358LD09P001E04E101R1_008.ab1   217 
  559    UCD003F_G02_BE488358LD09P001E04E101F1_008.ab1   471 
  659  C UCD003R_G02_BE488358LD09P001E04E101R1_008.ab1    85 
  663    UCD003F_G02_BE488358LD09P001E04E101F1_008.ab1   575 
  667  C UCD003R_G02_BE488358LD09P001E04E101R1_008.ab1    77 
  679    UCD003F_G02_BE488358LD09P001E04E101F1_008.ab1   591 
  683  C UCD003R_G02_BE488358LD09P001E04E101R1_008.ab1    61 
  709    UCD003F_G02_BE488358LD09P001E04E101F1_008.ab1   621 
Contig length: old 896, new 895

Contig length: old 895, new 895
New start: 0