No. words: 1544; after pruning: 1518


Histogram of relative pair offsets, for read pairs with multiple alignments:
99     6

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 14.5 (1,1:652)  630  0.00 0.00 0.00  UCD003F_H02_BE488358LD10P001E04E101F1_016.ab1        1   653 (146)  C UCD003R_H02_BE488358LD10P001E04E101R1_016.ab1   (92)   653     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  328 nodes

 166 str. conn. components

Path
    1  C UCD003R_H02_BE488358LD10P001E04E101R1_016.ab1   745 
   96    UCD003F_H02_BE488358LD10P001E04E101F1_016.ab1     4 
  112  C UCD003R_H02_BE488358LD10P001E04E101R1_016.ab1   634 
  116    UCD003F_H02_BE488358LD10P001E04E101F1_016.ab1    24 
  128  C UCD003R_H02_BE488358LD10P001E04E101R1_016.ab1   618 
  136    UCD003F_H02_BE488358LD10P001E04E101F1_016.ab1    44 
  396  C UCD003R_H02_BE488358LD10P001E04E101R1_016.ab1   350 
  568    UCD003F_H02_BE488358LD10P001E04E101F1_016.ab1   476 
  572  C UCD003R_H02_BE488358LD10P001E04E101R1_016.ab1   174 
  632    UCD003F_H02_BE488358LD10P001E04E101F1_016.ab1   540 
  636  C UCD003R_H02_BE488358LD10P001E04E101R1_016.ab1   110 
  680    UCD003F_H02_BE488358LD10P001E04E101F1_016.ab1   588 
  684  C UCD003R_H02_BE488358LD10P001E04E101R1_016.ab1    62 
  712    UCD003F_H02_BE488358LD10P001E04E101F1_016.ab1   620 
  716  C UCD003R_H02_BE488358LD10P001E04E101R1_016.ab1    30 
  724    UCD003F_H02_BE488358LD10P001E04E101F1_016.ab1   632 
Contig length: old 891, new 891

Contig length: old 891, new 891
New start: 0