No. words: 1404; after pruning: 1378


Histogram of relative pair offsets, for read pairs with multiple alignments:
99     6

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 11.6 (1,1:661)  581  0.16 0.00 0.16  UCD003F_B03_BE488358LD12P001E04E101F1_025.ab1       52   663 (130)  C UCD003R_B03_BE488358LD12P001E04E101R1_025.ab1   (0)   611     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  302 nodes

 153 str. conn. components

Path
    1    UCD003F_B03_BE488358LD12P001E04E101F1_025.ab1     1 
   87  C UCD003R_B03_BE488358LD12P001E04E101R1_025.ab1   576 
   91    UCD003F_B03_BE488358LD12P001E04E101F1_025.ab1    91 
   95  C UCD003R_B03_BE488358LD12P001E04E101R1_025.ab1   568 
  103    UCD003F_B03_BE488358LD12P001E04E101F1_025.ab1   103 
  115  C UCD003R_B03_BE488358LD12P001E04E101R1_025.ab1   548 
  123    UCD003F_B03_BE488358LD12P001E04E101F1_025.ab1   123 
  131  C UCD003R_B03_BE488358LD12P001E04E101R1_025.ab1   532 
  147    UCD003F_B03_BE488358LD12P001E04E101F1_025.ab1   147 
  163  C UCD003R_B03_BE488358LD12P001E04E101R1_025.ab1   500 
  175    UCD003F_B03_BE488358LD12P001E04E101F1_025.ab1   175 
  187  C UCD003R_B03_BE488358LD12P001E04E101R1_025.ab1   476 
  199    UCD003F_B03_BE488358LD12P001E04E101F1_025.ab1   199 
  207  C UCD003R_B03_BE488358LD12P001E04E101R1_025.ab1   456 
  219    UCD003F_B03_BE488358LD12P001E04E101F1_025.ab1   219 
  267  C UCD003R_B03_BE488358LD12P001E04E101R1_025.ab1   396 
  271    UCD003F_B03_BE488358LD12P001E04E101F1_025.ab1   271 
  295  C UCD003R_B03_BE488358LD12P001E04E101R1_025.ab1   368 
  319    UCD003F_B03_BE488358LD12P001E04E101F1_025.ab1   319 
  351  C UCD003R_B03_BE488358LD12P001E04E101R1_025.ab1   312 
  379    UCD003F_B03_BE488358LD12P001E04E101F1_025.ab1   379 
  403  C UCD003R_B03_BE488358LD12P001E04E101R1_025.ab1   260 
  427    UCD003F_B03_BE488358LD12P001E04E101F1_025.ab1   427 
  431  C UCD003R_B03_BE488358LD12P001E04E101R1_025.ab1   232 
  443    UCD003F_B03_BE488358LD12P001E04E101F1_025.ab1   443 
  455  C UCD003R_B03_BE488358LD12P001E04E101R1_025.ab1   208 
  475    UCD003F_B03_BE488358LD12P001E04E101F1_025.ab1   475 
  479  C UCD003R_B03_BE488358LD12P001E04E101R1_025.ab1   184 
  483    UCD003F_B03_BE488358LD12P001E04E101F1_025.ab1   483 
  523  C UCD003R_B03_BE488358LD12P001E04E101R1_025.ab1   140 
  539    UCD003F_B03_BE488358LD12P001E04E101F1_025.ab1   539 
  543  C UCD003R_B03_BE488358LD12P001E04E101R1_025.ab1   120 
  551    UCD003F_B03_BE488358LD12P001E04E101F1_025.ab1   551 
  575  C UCD003R_B03_BE488358LD12P001E04E101R1_025.ab1    88 
  591    UCD003F_B03_BE488358LD12P001E04E101F1_025.ab1   591 
  595  C UCD003R_B03_BE488358LD12P001E04E101R1_025.ab1    68 
  623    UCD003F_B03_BE488358LD12P001E04E101F1_025.ab1   623 
Contig length: old 793, new 793

Contig length: old 793, new 793
New start: 0