No. words: 694; after pruning: 668


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 2.1 (1,1:374)  119  0.79 0.79 0.00  UCD023F_E03_BE490204LD03P028E06P028E121F1_023.ab1        1   127 (0)  C UCD023R_E03_BE490204LD03P028E06P028E121R1_023.ab1   (191)   376   249 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  60 nodes

 32 str. conn. components

Path
    1  C UCD023R_E03_BE490204LD03P028E06P028E121R1_023.ab1   567 
Contig length: old 567, new 567

Contig length: old 567, new 567
New start: 0