No. words: 1836; after pruning: 1810


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 19.1 (1,1:892)  862  0.34 0.00 0.00  UCD025F_B06_BE490384Sn24P001F04P021B081F1_046.ab1        1   893 (14)  C UCD025R_B06_BE490384Sn24P001F04P021B081R1_046.ab1   (36)   893     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  444 nodes

 224 str. conn. components

Path
    1  C UCD025R_B06_BE490384Sn24P001F04P021B081R1_046.ab1   929 
   40    UCD025F_B06_BE490384Sn24P001F04P021B081F1_046.ab1     4 
   60  C UCD025R_B06_BE490384Sn24P001F04P021B081R1_046.ab1   870 
   64    UCD025F_B06_BE490384Sn24P001F04P021B081F1_046.ab1    28 
  566  C UCD025R_B06_BE490384Sn24P001F04P021B081R1_046.ab1   364 
  926    UCD025F_B06_BE490384Sn24P001F04P021B081F1_046.ab1   890 
Contig length: old 943, new 943

Contig length: old 943, new 943
New start: 0