No. words: 1784; after pruning: 1758


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 19.0 (1,1:893)  835  0.00 0.00 0.00  UCD025F_G06_BE490384Sn29P001F04P021B081F1_036.ab1       40   894 (35)  C UCD025R_G06_BE490384Sn29P001F04P021B081R1_036.ab1   (0)   855     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  428 nodes

 216 str. conn. components

Path
    1    UCD025F_G06_BE490384Sn29P001F04P021B081F1_036.ab1     1 
  524  C UCD025R_G06_BE490384Sn29P001F04P021B081R1_036.ab1   371 
  528    UCD025F_G06_BE490384Sn29P001F04P021B081F1_036.ab1   528 
  532  C UCD025R_G06_BE490384Sn29P001F04P021B081R1_036.ab1   363 
  888    UCD025F_G06_BE490384Sn29P001F04P021B081F1_036.ab1   888 
Contig length: old 929, new 929

Contig length: old 929, new 929
New start: 0