No. words: 1471; after pruning: 1445


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.5 (1,1:831)  619  0.00 0.00 0.16  UCD025F_B05_BE490384Ta16P001F04P021B081F1_045.ab1       19   657 (0)  C UCD025R_B05_BE490384Ta16P001F04P021B081R1_045.ab1   (0)   814   177 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  318 nodes

 161 str. conn. components

Path
    1    UCD025F_B05_BE490384Ta16P001F04P021B081F1_045.ab1     1 
  215  C UCD025R_B05_BE490384Ta16P001F04P021B081R1_045.ab1   618 
  219    UCD025F_B05_BE490384Ta16P001F04P021B081F1_045.ab1   219 
  387  C UCD025R_B05_BE490384Ta16P001F04P021B081R1_045.ab1   446 
  407    UCD025F_B05_BE490384Ta16P001F04P021B081F1_045.ab1   407 
  423  C UCD025R_B05_BE490384Ta16P001F04P021B081R1_045.ab1   410 
  427    UCD025F_B05_BE490384Ta16P001F04P021B081F1_045.ab1   427 
  443  C UCD025R_B05_BE490384Ta16P001F04P021B081R1_045.ab1   390 
Contig length: old 832, new 832

Contig length: old 832, new 832
New start: 0