No. words: 1739; after pruning: 1713


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 18.8 (1,1:891)  824  0.00 0.00 0.00  UCD025F_C05_BE490384Ta17P001F04P021B081F1_043.ab1        1   845 (0)  C UCD025R_C05_BE490384Ta17P001F04P021B081R1_043.ab1   (2)   892    48 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  424 nodes

 214 str. conn. components

Path
    1  C UCD025R_C05_BE490384Ta17P001F04P021B081R1_043.ab1   894 
    6    UCD025F_C05_BE490384Ta17P001F04P021B081F1_043.ab1     4 
  530  C UCD025R_C05_BE490384Ta17P001F04P021B081R1_043.ab1   365 
Contig length: old 894, new 894

Contig length: old 894, new 894
New start: 0