No. words: 1343; after pruning: 1317


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 6.3 (1,1:1050)  273  0.68 0.00 0.00  UCD007F_E08_BE490763LD02P012G06P012G121F1_056.ab1      372   663 (0)  C UCD007R_E08_BE490763LD02P012G06P012G121R1_056.ab1   (0)   680   389 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  144 nodes

 74 str. conn. components

Path
    1    UCD007F_E08_BE490763LD02P012G06P012G121F1_056.ab1     1 
  511  C UCD007R_E08_BE490763LD02P012G06P012G121R1_056.ab1   541 
  527    UCD007F_E08_BE490763LD02P012G06P012G121F1_056.ab1   527 
  531  C UCD007R_E08_BE490763LD02P012G06P012G121R1_056.ab1   521 
Contig length: old 1051, new 1051

Contig length: old 1051, new 1051
New start: 0