No. words: 1347; after pruning: 1321


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 5.6 (1,1:1042)  281  0.99 0.00 0.00  UCD007F_F08_BE490763LD03P012G06P012G121F1_054.ab1      384   687 (0)  C UCD007R_F08_BE490763LD03P012G06P012G121R1_054.ab1   (0)   660   357 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  144 nodes

 74 str. conn. components

Path
    1    UCD007F_F08_BE490763LD03P012G06P012G121F1_054.ab1     1 
  531  C UCD007R_F08_BE490763LD03P012G06P012G121R1_054.ab1   513 
Contig length: old 1043, new 1043

Contig length: old 1043, new 1043
New start: 0