No. words: 1429; after pruning: 1403


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 5.7 (1,1:1111)  287  1.27 0.32 0.00  UCD007F_C09_BE490763LD08P012G06P012G121F1_075.ab1      496   811 (0)  C UCD007R_C09_BE490763LD08P012G06P012G121R1_075.ab1   (0)   618   302 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  146 nodes

 75 str. conn. components

Path
    1    UCD007F_C09_BE490763LD08P012G06P012G121F1_075.ab1     1 
  606  C UCD007R_C09_BE490763LD08P012G06P012G121R1_075.ab1   508 
  622    UCD007F_C09_BE490763LD08P012G06P012G121F1_075.ab1   622 
  630  C UCD007R_C09_BE490763LD08P012G06P012G121R1_075.ab1   484 
Contig length: old 1112, new 1113

Contig length: old 1113, new 1113
New start: 0