No. words: 1466; after pruning: 1440


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.9 (1,1:974)  467  0.00 0.00 0.00  UCD015F_F09_BE490763Sn24P025H10P012G121F1_069.ab1      257   747 (0)  C UCD015R_F09_BE490763Sn24P025H10P012G121R1_069.ab1   (0)   719   229 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  248 nodes

 126 str. conn. components

Path
    1    UCD015F_F09_BE490763Sn24P025H10P012G121F1_069.ab1     1 
  372  C UCD015R_F09_BE490763Sn24P025H10P012G121R1_069.ab1   604 
  380    UCD015F_F09_BE490763Sn24P025H10P012G121F1_069.ab1   380 
  392  C UCD015R_F09_BE490763Sn24P025H10P012G121R1_069.ab1   584 
Contig length: old 975, new 975

Contig length: old 975, new 975
New start: 0