No. words: 1473; after pruning: 1447


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.3 (1,1:986)  458  0.41 0.00 0.00  UCD015F_G09_BE490763Sn25P025H10P012G121F1_067.ab1      265   750 (0)  C UCD015R_G09_BE490763Sn25P025H10P012G121R1_067.ab1   (0)   723   238 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  240 nodes

 122 str. conn. components

Path
    1    UCD015F_G09_BE490763Sn25P025H10P012G121F1_067.ab1     1 
  390  C UCD015R_G09_BE490763Sn25P025H10P012G121R1_067.ab1   598 
  402    UCD015F_G09_BE490763Sn25P025H10P012G121F1_067.ab1   402 
  410  C UCD015R_G09_BE490763Sn25P025H10P012G121R1_067.ab1   578 
  470    UCD015F_G09_BE490763Sn25P025H10P012G121F1_067.ab1   470 
  474  C UCD015R_G09_BE490763Sn25P025H10P012G121R1_067.ab1   514 
Contig length: old 987, new 987

Contig length: old 987, new 987
New start: 0